Gene detail information of Glyur000210s00014457.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31320.10poly(ADP-ribose) polymerase 2
NRXP_004493762.10PREDICTED: poly [ADP-ribose] polymerase 1-like [Cicer arietinum]
COGYP_001547522.16.00E-17Poly(ADP-ribose) polymerase catalytic subunit [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9ZP54|PARP1_ARATH0Poly [ADP-ribose] polymerase 1
trEMBLtr|A0A072U2F3|A0A072U2F3_MEDTR0Poly(ADP-ribose) polymerase domain protein {ECO:0000313|EMBL:KEH23887.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00210172396180328+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10798PARP EC:2.4.2.30 Base excision repair map03410
Apoptosismap04210
Apoptosis - flymap04214
Longevity regulating pathway - wormmap04212


Gene Ontology

biological_process

GO:0006471  protein ADP-ribosylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003950  NAD+ ADP-ribosyltransferase activity

GO:0008270  zinc ion binding

GO:0051287  NAD binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000210s00014457.1PF00645.13zf-PARP13894.70E-22
Glyur000210s00014457.1PF00645.13zf-PARP1091816.90E-17
Glyur000210s00014457.1PF08063.7PADR13023544.10E-21
Glyur000210s00014457.1PF00533.21BRCT4134822.20E-05
Glyur000210s00014457.1PF05406.10WGR5336135.40E-16
Glyur000210s00014457.1PF02877.9PARP_reg6477781.00E-34
Glyur000210s00014457.1PF00644.15PARP7809927.10E-77


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.828
SRR1783600control29.083
SRR1783602moderate drought stress38.963
SRR1811619moderate drought stress38.504

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.940
DRR006520Root Summer glycyrrhizin high producing strain33.873
DRR006521Root Winter glycyrrhizin high producing strain3.553
DRR006522Root Winter glycyrrhizin high producing strain3.406
DRR006523Root Summer glycyrrhizin low producing strain20.240
DRR006524Root Summer glycyrrhizin low producing strain20.231
DRR006525Leaf Summer glycyrrhizin high producing strain4.465
DRR006526Leaf Summer glycyrrhizin high producing strain4.374

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.013
SRR2868004Drought Stress(Tissue:root)27.374
SRR2967015Control (Tissue:root)39.676

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.699
SRR9715740Leave2.374
SRR9715741Leave2.242
SRR9715739Root4.514
SRR9715742Root20.215
SRR9715743Root16.197

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.244
SRR8749028MeJA induced 9h17.944
SRR8749029MeJA induced 9h15.560
SRR8749030Uninduced1.682
SRR8749031Uninduced1.520
SRR8749032Uninduced3.170

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root40.811
SRR8400027Control-Root45.957

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved