Gene detail information of Glyur000211s00017644.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G61850.42.00E-41Dof-type zinc finger DNA-binding family protein
NRAFK36668.11.65E-121unknown [Lotus japonicus]
Swissprottr|Q9ZPY0|DOF25_ARATH5.00E-59Dof zinc finger protein DOF2.5
trEMBLtr|I3S8S6|I3S8S6_LOTJA6.00E-122Uncharacterized protein {ECO:0000313|EMBL:AFK36668.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00211100354101316-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000211s00017644.1PF02701.10zf-Dof23827.30E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.483
SRR1783600control37.841
SRR1783602moderate drought stress44.650
SRR1811619moderate drought stress45.306

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.743
DRR006520Root Summer glycyrrhizin high producing strain40.119
DRR006521Root Winter glycyrrhizin high producing strain6.830
DRR006522Root Winter glycyrrhizin high producing strain6.600
DRR006523Root Summer glycyrrhizin low producing strain58.301
DRR006524Root Summer glycyrrhizin low producing strain53.542
DRR006525Leaf Summer glycyrrhizin high producing strain21.443
DRR006526Leaf Summer glycyrrhizin high producing strain21.301

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)78.294
SRR2868004Drought Stress(Tissue:root)130.622
SRR2967015Control (Tissue:root)118.699

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.899
SRR9715740Leave18.030
SRR9715741Leave30.908
SRR9715739Root3.640
SRR9715742Root23.797
SRR9715743Root16.445

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.001
SRR8749028MeJA induced 9h1.535
SRR8749029MeJA induced 9h2.969
SRR8749030Uninduced3.135
SRR8749031Uninduced1.720
SRR8749032Uninduced1.779

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root80.491
SRR8400027Control-Root54.186

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved