Gene detail information of Glyur000211s00017646.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49330.1 | 2.00E-52 | myb domain protein 111 |
| NR | XP_004510651.1 | 4.62E-133 | PREDICTED: transcription repressor MYB5-like [Cicer arietinum] |
| Swissprot | tr|Q9SZP1|MYB4_ARATH | 1.00E-62 | Transcription repressor MYB4 |
| trEMBL | tr|I1KHT7|I1KHT7_SOYBN | 2.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G05960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 121970 | 123450 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000211s00017646.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 3.00E-14 |
| Glyur000211s00017646.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 3.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.976 |
| SRR1783600 | control | 35.340 |
| SRR1783602 | moderate drought stress | 40.753 |
| SRR1811619 | moderate drought stress | 40.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.193 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.192 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.456 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.348 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.637 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.434 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.610 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 31.659 |
| SRR2868004 | Drought Stress(Tissue:root) | 102.193 |
| SRR2967015 | Control (Tissue:root) | 59.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.944 |
| SRR9715740 | Leave | 0.264 |
| SRR9715741 | Leave | 6.204 |
| SRR9715739 | Root | 2.167 |
| SRR9715742 | Root | 6.391 |
| SRR9715743 | Root | 4.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.080 |
| SRR8749028 | MeJA induced 9h | 23.258 |
| SRR8749029 | MeJA induced 9h | 6.389 |
| SRR8749030 | Uninduced | 849.454 |
| SRR8749031 | Uninduced | 762.076 |
| SRR8749032 | Uninduced | 335.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 39.736 |
| SRR8400027 | Control-Root | 32.386 |