Gene detail information of Glyur000211s00017659.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01250.1 | 1.00E-34 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004510664.1 | 2.05E-92 | PREDICTED: ethylene-responsive transcription factor ERF023-like [Cicer arietinum] |
| Swissprot | tr|Q1ECI2|ERF23_ARATH | 5.00E-51 | Ethylene-responsive transcription factor ERF023 |
| trEMBL | tr|I1KHU6|I1KHU6_SOYBN | 8.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G06080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00211 | 219564 | 220145 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000211s00017659.1 | PF00847.15 | AP2 | 41 | 91 | 1.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.484 |
| SRR1783600 | control | 5.118 |
| SRR1783602 | moderate drought stress | 4.479 |
| SRR1811619 | moderate drought stress | 4.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.326 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.397 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.139 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.139 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.299 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.710 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.730 |
| SRR2967015 | Control (Tissue:root) | 8.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 64.676 |
| SRR9715740 | Leave | 78.288 |
| SRR9715741 | Leave | 22.716 |
| SRR9715739 | Root | 18.295 |
| SRR9715742 | Root | 13.507 |
| SRR9715743 | Root | 13.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.085 |
| SRR8749032 | Uninduced | 0.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.791 |
| SRR8400027 | Control-Root | 13.968 |