Gene detail information of Glyur000211s00017661.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01260.34.00E-134basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NRKEH18633.10ABA-inducible bHLH-type transcription factor [Medicago truncatula]
Swissprottr|Q9LNJ5|BH013_ARATH0Transcription factor bHLH13
trEMBLtr|A0A072TP53|A0A072TP53_MEDTR0ABA-inducible bHLH-type transcription factor {ECO:0000313|EMBL:KEH18633.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00211244788246689+


Gene family

Gene familysubfamily
Transcription Factors FamilybHLH


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000211s00017661.1PF14215.1bHLH-MYC_N542448.90E-46
Glyur000211s00017661.1PF00010.21HLH4655111.70E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.767
SRR1783600control16.776
SRR1783602moderate drought stress16.295
SRR1811619moderate drought stress16.315

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.292
DRR006520Root Summer glycyrrhizin high producing strain57.979
DRR006521Root Winter glycyrrhizin high producing strain26.495
DRR006522Root Winter glycyrrhizin high producing strain25.632
DRR006523Root Summer glycyrrhizin low producing strain66.850
DRR006524Root Summer glycyrrhizin low producing strain72.525
DRR006525Leaf Summer glycyrrhizin high producing strain18.102
DRR006526Leaf Summer glycyrrhizin high producing strain18.176

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.570
SRR2868004Drought Stress(Tissue:root)30.880
SRR2967015Control (Tissue:root)44.323

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave98.897
SRR9715740Leave105.779
SRR9715741Leave116.299
SRR9715739Root73.665
SRR9715742Root145.122
SRR9715743Root122.173

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.546
SRR8749028MeJA induced 9h68.115
SRR8749029MeJA induced 9h55.822
SRR8749030Uninduced37.269
SRR8749031Uninduced60.349
SRR8749032Uninduced76.183

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.067
SRR8400027Control-Root25.516

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved