Gene detail information of Glyur000212s00017509.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65700.20Leucine-rich receptor-like protein kinase family protein
NRNP_001235080.10receptor-like protein kinase 3 precursor [Glycine max]
COGYP_004775215.13.00E-54RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O49545|BAME1_ARATH0Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 (Precursor)
trEMBLtr|I1J9I4|I1J9I4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G40590.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002127769882527+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000212s00017509.1PF08263.7LRRNT_226649.30E-14
Glyur000212s00017509.1PF00560.28LRR_11401570.85
Glyur000212s00017509.1PF00560.28LRR_11641810.49
Glyur000212s00017509.1PF13855.1LRR_82853437.30E-07
Glyur000212s00017509.1PF00560.28LRR_13573780.24
Glyur000212s00017509.1PF13855.1LRR_85255847.20E-08
Glyur000212s00017509.1PF07714.12Pkinase_Tyr6929622.10E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.513
SRR1783600control22.618
SRR1783602moderate drought stress11.711
SRR1811619moderate drought stress11.613

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.894
DRR006520Root Summer glycyrrhizin high producing strain11.736
DRR006521Root Winter glycyrrhizin high producing strain0.128
DRR006522Root Winter glycyrrhizin high producing strain0.076
DRR006523Root Summer glycyrrhizin low producing strain6.230
DRR006524Root Summer glycyrrhizin low producing strain6.022
DRR006525Leaf Summer glycyrrhizin high producing strain5.055
DRR006526Leaf Summer glycyrrhizin high producing strain4.908

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.964
SRR2868004Drought Stress(Tissue:root)18.120
SRR2967015Control (Tissue:root)21.460

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.240
SRR9715740Leave0.446
SRR9715741Leave0.387
SRR9715739Root15.095
SRR9715742Root15.013
SRR9715743Root14.918

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.221
SRR8749028MeJA induced 9h5.852
SRR8749029MeJA induced 9h6.258
SRR8749030Uninduced4.075
SRR8749031Uninduced0.406
SRR8749032Uninduced1.254

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.692
SRR8400027Control-Root33.593

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved