Gene detail information of Glyur000212s00017512.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65710.10HAESA-like 2
NRXP_006573682.10PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2-like [Glycine max]
COGYP_004775215.14.00E-50RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGX3|HSL2_ARATH0LRR receptor-like serine/threonine-protein kinase HSL2 (Precursor)
trEMBLtr|K7K4S9|K7K4S9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G40560.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0021298799103313+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000212s00017512.1PF08263.7LRRNT_225663.20E-09
Glyur000212s00017512.1PF00560.28LRR_11201380.23
Glyur000212s00017512.1PF13855.1LRR_81442031.80E-07
Glyur000212s00017512.1PF00560.28LRR_12412630.56
Glyur000212s00017512.1PF00560.28LRR_15295480.023
Glyur000212s00017512.1PF00069.20Pkinase6879001.50E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.079
SRR1783600control15.111
SRR1783602moderate drought stress10.250
SRR1811619moderate drought stress10.138

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.397
DRR006520Root Summer glycyrrhizin high producing strain12.220
DRR006521Root Winter glycyrrhizin high producing strain0.768
DRR006522Root Winter glycyrrhizin high producing strain0.770
DRR006523Root Summer glycyrrhizin low producing strain10.292
DRR006524Root Summer glycyrrhizin low producing strain10.345
DRR006525Leaf Summer glycyrrhizin high producing strain1.987
DRR006526Leaf Summer glycyrrhizin high producing strain1.995

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.389
SRR2868004Drought Stress(Tissue:root)10.295
SRR2967015Control (Tissue:root)11.778

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.620
SRR9715740Leave6.168
SRR9715741Leave4.804
SRR9715739Root16.674
SRR9715742Root45.186
SRR9715743Root39.766

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.364
SRR8749028MeJA induced 9h1.688
SRR8749029MeJA induced 9h1.130
SRR8749030Uninduced0.408
SRR8749031Uninduced0.678
SRR8749032Uninduced0.631

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.004
SRR8400027Control-Root30.642

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved