Gene detail information of Glyur000212s00017518.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65720.10nitrogen fixation S (NIFS)-like 1
NRXP_004511800.10PREDICTED: cysteine desulfurase 1, mitochondrial-like [Cicer arietinum]
COGNP_360367.10cysteine desulfurase [Rickettsia conorii str. Malish 7]
Swissprottr|O49543|NFS1_ARATH0Cysteine desulfurase 1, mitochondrial (Precursor)
trEMBLtr|I1LH30|I1LH30_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G04800.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00212116355117731+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04487iscS, NFS1 EC:2.8.1.7 Thiamine metabolism map00730
Sulfur relay systemmap04122


Gene Ontology

biological_process

GO:0006534  cysteine metabolic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding

GO:0031071  cysteine desulfurase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000212s00017518.1PF00266.14Aminotran_5614222.00E-88


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control83.424
SRR1783600control83.769
SRR1783602moderate drought stress111.801
SRR1811619moderate drought stress111.230

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain70.069
DRR006520Root Summer glycyrrhizin high producing strain67.202
DRR006521Root Winter glycyrrhizin high producing strain61.775
DRR006522Root Winter glycyrrhizin high producing strain59.888
DRR006523Root Summer glycyrrhizin low producing strain53.303
DRR006524Root Summer glycyrrhizin low producing strain52.203
DRR006525Leaf Summer glycyrrhizin high producing strain63.748
DRR006526Leaf Summer glycyrrhizin high producing strain60.425

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)83.743
SRR2868004Drought Stress(Tissue:root)70.000
SRR2967015Control (Tissue:root)70.783

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave74.646
SRR9715740Leave92.854
SRR9715741Leave92.810
SRR9715739Root96.647
SRR9715742Root90.868
SRR9715743Root87.229

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.021
SRR8749028MeJA induced 9h20.607
SRR8749029MeJA induced 9h20.375
SRR8749030Uninduced13.985
SRR8749031Uninduced9.269
SRR8749032Uninduced8.752

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root75.783
SRR8400027Control-Root68.232

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved