Gene detail information of Glyur000212s00017527.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37790.14.00E-59Homeobox-leucine zipper protein family
NRKHN36326.11.03E-149Homeobox-leucine zipper protein HAT22 [Glycine soja]
Swissprottr|P46604|HAT22_ARATH2.00E-93Homeobox-leucine zipper protein HAT22
trEMBLtr|I1LH34|I1LH34_SOYBN9.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G04840.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00212165801168001-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB
EAR motif-containing ProteinsHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000212s00017527.1PF00046.24Homeobox1612152.90E-16
Glyur000212s00017527.1PF02183.13HALZ2172601.20E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.358
SRR1783600control18.312
SRR1783602moderate drought stress8.594
SRR1811619moderate drought stress8.474

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.320
DRR006520Root Summer glycyrrhizin high producing strain45.853
DRR006521Root Winter glycyrrhizin high producing strain149.394
DRR006522Root Winter glycyrrhizin high producing strain145.713
DRR006523Root Summer glycyrrhizin low producing strain150.903
DRR006524Root Summer glycyrrhizin low producing strain153.448
DRR006525Leaf Summer glycyrrhizin high producing strain27.494
DRR006526Leaf Summer glycyrrhizin high producing strain27.561

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.416
SRR2868004Drought Stress(Tissue:root)25.815
SRR2967015Control (Tissue:root)20.898

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.863
SRR9715740Leave38.046
SRR9715741Leave25.667
SRR9715739Root6.797
SRR9715742Root13.711
SRR9715743Root12.189

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.019
SRR8749028MeJA induced 9h23.345
SRR8749029MeJA induced 9h26.145
SRR8749030Uninduced2.292
SRR8749031Uninduced6.683
SRR8749032Uninduced6.748

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.111
SRR8400027Control-Root76.562

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved