Gene detail information of Glyur000212s00017531.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65780.12.00E-167branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)
NRXP_004511802.10PREDICTED: branched-chain-amino-acid aminotransferase 5, chloroplastic-like [Cicer arietinum]
COGYP_004196118.11.00E-92branched chain amino acid aminotransferase apoenzyme [Desulfobulbus propionicus DSM 2032]
Swissprottr|Q9FYA6|BCAT5_ARATH0Branched-chain-amino-acid aminotransferase 5, chloroplastic (Precursor)
trEMBLtr|I1J9H2|I1J9H2_SOYBN0Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00212192547197247+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00826E2.6.1.42, ilvE EC:2.6.1.42 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Cysteine and methionine metabolismmap00270
Valine, leucine and isoleucine degradationmap00280
Valine, leucine and isoleucine biosynthesismap00290
Pantothenate and CoA biosynthesismap00770


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009081  branched-chain amino acid metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004084  branched-chain-amino-acid transaminase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000212s00017531.1PF01063.14Aminotran_41483682.60E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.484
SRR1783600control25.759
SRR1783602moderate drought stress18.680
SRR1811619moderate drought stress18.517

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.687
DRR006520Root Summer glycyrrhizin high producing strain26.441
DRR006521Root Winter glycyrrhizin high producing strain16.268
DRR006522Root Winter glycyrrhizin high producing strain15.698
DRR006523Root Summer glycyrrhizin low producing strain22.779
DRR006524Root Summer glycyrrhizin low producing strain23.243
DRR006525Leaf Summer glycyrrhizin high producing strain17.596
DRR006526Leaf Summer glycyrrhizin high producing strain17.297

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.881
SRR2868004Drought Stress(Tissue:root)48.097
SRR2967015Control (Tissue:root)36.044

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.063
SRR9715740Leave23.219
SRR9715741Leave27.660
SRR9715739Root34.650
SRR9715742Root30.407
SRR9715743Root31.695

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.395
SRR8749028MeJA induced 9h20.892
SRR8749029MeJA induced 9h19.006
SRR8749030Uninduced8.290
SRR8749031Uninduced6.798
SRR8749032Uninduced7.059

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.194
SRR8400027Control-Root42.851

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved