Gene detail information of Glyur000213s00016088.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42620.20metalloendopeptidases;zinc ion binding
NRXP_004499123.10PREDICTED: leishmanolysin-like peptidase-like [Cicer arietinum]
trEMBLtr|I1MXU3|I1MXU3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002137495385528+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01404GP63 EC:3.4.24.36 Leishmaniasis map05140
African trypanosomiasismap05143


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0007155  cell adhesion


cellular_component

GO:0016020  membrane


molecular_function

GO:0004222  metalloendopeptidase activity

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000213s00016088.2PF01457.11Peptidase_M81745994.70E-84


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.181
SRR1783600control10.244
SRR1783602moderate drought stress6.941
SRR1811619moderate drought stress6.878

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.953
DRR006520Root Summer glycyrrhizin high producing strain12.825
DRR006521Root Winter glycyrrhizin high producing strain6.435
DRR006522Root Winter glycyrrhizin high producing strain6.149
DRR006523Root Summer glycyrrhizin low producing strain18.191
DRR006524Root Summer glycyrrhizin low producing strain17.683
DRR006525Leaf Summer glycyrrhizin high producing strain7.951
DRR006526Leaf Summer glycyrrhizin high producing strain8.136

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.510
SRR2868004Drought Stress(Tissue:root)31.712
SRR2967015Control (Tissue:root)32.716

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.819
SRR9715740Leave7.029
SRR9715741Leave7.675
SRR9715739Root6.894
SRR9715742Root14.410
SRR9715743Root12.998

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.658
SRR8749028MeJA induced 9h19.602
SRR8749029MeJA induced 9h9.582
SRR8749030Uninduced9.000
SRR8749031Uninduced5.469
SRR8749032Uninduced4.124

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.838
SRR8400027Control-Root26.780

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved