Gene detail information of Glyur000213s00016091.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75020.28.00E-145lysophosphatidyl acyltransferase 4
NRXP_004499122.10PREDICTED: LOW QUALITY PROTEIN: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4-like [Cicer arietinum]
COGYP_001002800.11.00E-07phospholipid/glycerol acyltransferase [Halorhodospira halophila SL1]
Swissprottr|Q8L4Y2|LPAT4_ARATH1.00E-179Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4
trEMBLtr|I1MXU1|I1MXU1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36670.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002139452698317-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13513LCLAT1, AGPAT8 EC:2.3.1.- 2.3.1.51 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000213s00016091.3PF01553.16Acyltransferase902425.80E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.258
SRR1783600control3.339
SRR1783602moderate drought stress2.330
SRR1811619moderate drought stress2.309

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.739
DRR006520Root Summer glycyrrhizin high producing strain6.728
DRR006521Root Winter glycyrrhizin high producing strain36.262
DRR006522Root Winter glycyrrhizin high producing strain35.536
DRR006523Root Summer glycyrrhizin low producing strain21.770
DRR006524Root Summer glycyrrhizin low producing strain21.687
DRR006525Leaf Summer glycyrrhizin high producing strain14.132
DRR006526Leaf Summer glycyrrhizin high producing strain13.936

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.590
SRR2868004Drought Stress(Tissue:root)28.190
SRR2967015Control (Tissue:root)21.596

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.513
SRR9715740Leave17.389
SRR9715741Leave23.253
SRR9715739Root1.953
SRR9715742Root6.097
SRR9715743Root4.904

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.443
SRR8749028MeJA induced 9h25.013
SRR8749029MeJA induced 9h37.861
SRR8749030Uninduced35.567
SRR8749031Uninduced47.265
SRR8749032Uninduced31.349

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.483
SRR8400027Control-Root9.683

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved