Gene detail information of Glyur000213s00016108.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23140.2 | 4.00E-13 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6 |
| NR | KEH16075.1 | 1.28E-70 | cysteine-rich receptor-kinase-like protein [Medicago truncatula] |
| Swissprot | tr|Q8H199|CRK14_ARATH | 1.00E-20 | Cysteine-rich receptor-like protein kinase 14 (Precursor) |
| trEMBL | tr|A0A072TR74|A0A072TR74_MEDTR | 5.00E-71 | Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:KEH16075.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00213 | 227160 | 230340 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000213s00016108.1 | PF01657.12 | Stress-antifung | 31 | 99 | 4.00E-08 |
| Glyur000213s00016108.1 | PF01657.12 | Stress-antifung | 115 | 191 | 1.60E-15 |
| Glyur000213s00016108.1 | PF07714.12 | Pkinase_Tyr | 273 | 306 | 1.90E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.037 |
| SRR1783602 | moderate drought stress | 0.006 |
| SRR1811619 | moderate drought stress | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.560 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.671 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.721 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.714 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.096 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.176 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.249 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.295 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.177 |
| SRR2967015 | Control (Tissue:root) | 0.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.093 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.147 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.037 |
| SRR9715743 | Root | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.942 |
| SRR8749028 | MeJA induced 9h | 0.420 |
| SRR8749029 | MeJA induced 9h | 0.167 |
| SRR8749030 | Uninduced | 2.729 |
| SRR8749031 | Uninduced | 0.569 |
| SRR8749032 | Uninduced | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |