Gene detail information of Glyur000214s00016040.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G20530.11.00E-133Protein kinase superfamily protein
NRXP_004486125.10PREDICTED: probable serine/threonine-protein kinase RLCKVII-like [Cicer arietinum]
COGYP_001543675.15.00E-28serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q0WRY5|CDL1_ARATH2.00E-147Serine/threonine-protein kinase CDL1 {ECO:0000305}
trEMBLtr|A0A072V667|A0A072V667_MEDTR0Receptor Serine/Threonine kinase {ECO:0000313|EMBL:KEH36823.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00214248136250352-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000214s00016040.1PF00069.20Pkinase832941.60E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.125
SRR1783600control0.125
SRR1783602moderate drought stress0.032
SRR1811619moderate drought stress0.032

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.185
DRR006520Root Summer glycyrrhizin high producing strain0.179
DRR006521Root Winter glycyrrhizin high producing strain0.095
DRR006522Root Winter glycyrrhizin high producing strain0.092
DRR006523Root Summer glycyrrhizin low producing strain0.376
DRR006524Root Summer glycyrrhizin low producing strain0.448
DRR006525Leaf Summer glycyrrhizin high producing strain0.146
DRR006526Leaf Summer glycyrrhizin high producing strain0.193

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.279
SRR2868004Drought Stress(Tissue:root)1.299
SRR2967015Control (Tissue:root)1.536

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.236
SRR9715740Leave0.214
SRR9715741Leave0.583
SRR9715739Root0.142
SRR9715742Root0.555
SRR9715743Root1.115

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.655
SRR8749028MeJA induced 9h1.785
SRR8749029MeJA induced 9h1.564
SRR8749030Uninduced1.414
SRR8749031Uninduced1.735
SRR8749032Uninduced1.379

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.086
SRR8400027Control-Root1.608

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved