Gene detail information of Glyur000215s00017027.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74120.1 | 1.00E-109 | Mitochondrial transcription termination factor family protein |
| NR | XP_004488436.1 | 0 | PREDICTED: uncharacterized protein LOC101513737 [Cicer arietinum] |
| trEMBL | tr|A0A072V7X6|A0A072V7X6_MEDTR | 0 | Transcription termination factor family protein {ECO:0000313|EMBL:KEH38164.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00215 | 177467 | 178831 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000215s00017027.1 | PF02536.9 | mTERF | 51 | 394 | 8.40E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.611 |
| SRR1783600 | control | 5.730 |
| SRR1783602 | moderate drought stress | 9.972 |
| SRR1811619 | moderate drought stress | 9.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.052 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.263 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.137 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.140 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.460 |
| SRR2967015 | Control (Tissue:root) | 12.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.833 |
| SRR9715740 | Leave | 9.455 |
| SRR9715741 | Leave | 9.969 |
| SRR9715739 | Root | 12.851 |
| SRR9715742 | Root | 10.366 |
| SRR9715743 | Root | 10.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.339 |
| SRR8749028 | MeJA induced 9h | 13.446 |
| SRR8749029 | MeJA induced 9h | 7.603 |
| SRR8749030 | Uninduced | 10.603 |
| SRR8749031 | Uninduced | 12.943 |
| SRR8749032 | Uninduced | 10.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.230 |
| SRR8400027 | Control-Root | 9.790 |