Gene detail information of Glyur000216s00014164.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12470.1 | 2.00E-131 | Protein of unknown function (DUF3411) |
| NR | XP_004505639.1 | 0 | PREDICTED: uncharacterized protein LOC101503763 [Cicer arietinum] |
| trEMBL | tr|G7JRM8|G7JRM8_MEDTR | 0 | DUF3411 domain protein {ECO:0000313|EMBL:AES89561.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00216 | 230797 | 235076 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000216s00014164.1 | PF11891.3 | DUF3411 | 155 | 332 | 1.80E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.390 |
| SRR1783600 | control | 17.554 |
| SRR1783602 | moderate drought stress | 10.508 |
| SRR1811619 | moderate drought stress | 10.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.181 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.770 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.702 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.783 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 75.562 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.015 |
| SRR2967015 | Control (Tissue:root) | 36.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.015 |
| SRR9715740 | Leave | 4.027 |
| SRR9715741 | Leave | 5.448 |
| SRR9715739 | Root | 14.279 |
| SRR9715742 | Root | 15.810 |
| SRR9715743 | Root | 15.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.320 |
| SRR8749028 | MeJA induced 9h | 31.380 |
| SRR8749029 | MeJA induced 9h | 26.296 |
| SRR8749030 | Uninduced | 11.385 |
| SRR8749031 | Uninduced | 3.137 |
| SRR8749032 | Uninduced | 8.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 52.448 |
| SRR8400027 | Control-Root | 54.116 |