Gene detail information of Glyur000217s00014846.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09620.1 | 7.00E-61 | Mitochondrial transcription termination factor family protein |
| NR | XP_003556199.1 | 4.96E-137 | PREDICTED: uncharacterized protein LOC100797265 isoform X1 [Glycine max] |
| trEMBL | tr|I1NHA9|I1NHA9_SOYBN | 2.00E-137 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G31580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00217 | 84826 | 87601 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000217s00014846.1 | PF02536.9 | mTERF | 80 | 221 | 1.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.748 |
| SRR1783600 | control | 11.676 |
| SRR1783602 | moderate drought stress | 11.825 |
| SRR1811619 | moderate drought stress | 11.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.715 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.582 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.573 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.622 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.605 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.086 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 35.875 |
| SRR2868004 | Drought Stress(Tissue:root) | 40.780 |
| SRR2967015 | Control (Tissue:root) | 36.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 112.918 |
| SRR9715740 | Leave | 135.202 |
| SRR9715741 | Leave | 124.423 |
| SRR9715739 | Root | 5.575 |
| SRR9715742 | Root | 9.861 |
| SRR9715743 | Root | 9.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.311 |
| SRR8749028 | MeJA induced 9h | 32.856 |
| SRR8749029 | MeJA induced 9h | 50.089 |
| SRR8749030 | Uninduced | 42.456 |
| SRR8749031 | Uninduced | 21.248 |
| SRR8749032 | Uninduced | 22.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.032 |
| SRR8400027 | Control-Root | 26.935 |