Gene detail information of Glyur000217s00014849.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34420.18.00E-125leucine-rich repeat transmembrane protein kinase family protein
NRXP_004496359.10PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820-like [Cicer arietinum]
COGYP_004775215.14.00E-55RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O22938|Y2182_ARATH1.00E-148Leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 (Precursor)
trEMBLtr|A0A072VP05|A0A072VP05_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH43547.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00217121040124903+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000217s00014849.1PF08263.7LRRNT_236660.00018
Glyur000217s00014849.1PF13855.1LRR_8951551.50E-09
Glyur000217s00014849.1PF00560.28LRR_11691880.074
Glyur000217s00014849.1PF00560.28LRR_12412590.86
Glyur000217s00014849.1PF00560.28LRR_12883070.2
Glyur000217s00014849.1PF00560.28LRR_14304520.5
Glyur000217s00014849.1PF00560.28LRR_14544761.2
Glyur000217s00014849.1PF13855.1LRR_85045592.00E-09
Glyur000217s00014849.1PF07714.12Pkinase_Tyr7209492.40E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.588
SRR1783600control13.731
SRR1783602moderate drought stress11.376
SRR1811619moderate drought stress11.293

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.514
DRR006520Root Summer glycyrrhizin high producing strain33.788
DRR006521Root Winter glycyrrhizin high producing strain4.174
DRR006522Root Winter glycyrrhizin high producing strain3.969
DRR006523Root Summer glycyrrhizin low producing strain58.427
DRR006524Root Summer glycyrrhizin low producing strain58.603
DRR006525Leaf Summer glycyrrhizin high producing strain17.546
DRR006526Leaf Summer glycyrrhizin high producing strain17.534

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.553
SRR2868004Drought Stress(Tissue:root)38.607
SRR2967015Control (Tissue:root)33.988

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave90.502
SRR9715740Leave103.802
SRR9715741Leave104.910
SRR9715739Root26.981
SRR9715742Root113.517
SRR9715743Root94.520

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.950
SRR8749028MeJA induced 9h15.874
SRR8749029MeJA induced 9h7.384
SRR8749030Uninduced18.640
SRR8749031Uninduced1.851
SRR8749032Uninduced2.956

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.221
SRR8400027Control-Root28.792

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved