Gene detail information of Glyur000217s00014851.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34430.13.00E-1702-oxoacid dehydrogenases acyltransferase family protein
NRKEH43544.102-oxoacid dehydrogenase acyltransferase family protein [Medicago truncatula]
COGYP_007122333.11.00E-169pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component [Microcoleus sp. PCC 7113]
Swissprottr|Q9C8P0|ODP25_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic (Precursor)
trEMBLtr|A0A072VNF5|A0A072VNF5_MEDTR02-oxoacid dehydrogenase acyltransferase family protein {ECO:0000313|EMBL:KEH43544.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00217125970129072-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00627DLAT, aceF, pdhC EC:2.3.1.12 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000217s00014851.1PF00364.17Biotin_lipoyl421122.60E-17
Glyur000217s00014851.1PF02817.12E3_binding1812181.40E-13
Glyur000217s00014851.1PF00198.182-oxoacid_dh2454628.50E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.040
SRR1783600control19.122
SRR1783602moderate drought stress14.486
SRR1811619moderate drought stress14.164

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.383
DRR006520Root Summer glycyrrhizin high producing strain19.343
DRR006521Root Winter glycyrrhizin high producing strain6.524
DRR006522Root Winter glycyrrhizin high producing strain6.157
DRR006523Root Summer glycyrrhizin low producing strain15.860
DRR006524Root Summer glycyrrhizin low producing strain16.271
DRR006525Leaf Summer glycyrrhizin high producing strain22.078
DRR006526Leaf Summer glycyrrhizin high producing strain22.283

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.349
SRR2868004Drought Stress(Tissue:root)27.287
SRR2967015Control (Tissue:root)28.244

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.624
SRR9715740Leave16.176
SRR9715741Leave18.789
SRR9715739Root33.105
SRR9715742Root19.975
SRR9715743Root22.021

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.207
SRR8749028MeJA induced 9h9.540
SRR8749029MeJA induced 9h7.600
SRR8749030Uninduced3.277
SRR8749031Uninduced1.827
SRR8749032Uninduced2.558

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.826
SRR8400027Control-Root64.122

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved