Gene detail information of Glyur000217s00014853.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34370.27.00E-129C2H2 and C2HC zinc fingers superfamily protein
NRXP_004496356.10PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cicer arietinum]
Swissprottr|Q9C8N5|STOP1_ARATH0Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
trEMBLtr|I1LD60|I1LD60_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G35940.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00217140038141576+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003676  nucleic acid binding

GO:0046872  metal ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000217s00014853.1PF00096.21zf-C2H22612820.00013


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control200.545
SRR1783600control199.793
SRR1783602moderate drought stress204.561
SRR1811619moderate drought stress203.445

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain168.424
DRR006520Root Summer glycyrrhizin high producing strain168.958
DRR006521Root Winter glycyrrhizin high producing strain62.825
DRR006522Root Winter glycyrrhizin high producing strain61.176
DRR006523Root Summer glycyrrhizin low producing strain296.111
DRR006524Root Summer glycyrrhizin low producing strain300.023
DRR006525Leaf Summer glycyrrhizin high producing strain112.920
DRR006526Leaf Summer glycyrrhizin high producing strain113.891

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)116.028
SRR2868004Drought Stress(Tissue:root)167.761
SRR2967015Control (Tissue:root)168.774

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave241.716
SRR9715740Leave330.451
SRR9715741Leave367.036
SRR9715739Root74.470
SRR9715742Root221.778
SRR9715743Root186.447

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h126.116
SRR8749028MeJA induced 9h143.441
SRR8749029MeJA induced 9h110.634
SRR8749030Uninduced157.178
SRR8749031Uninduced170.249
SRR8749032Uninduced122.915

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root161.976
SRR8400027Control-Root159.215

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved