Gene detail information of Glyur000217s00014859.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G09510.10cytosolic invertase 2
NRXP_004496345.10PREDICTED: uncharacterized protein LOC101512400 [Cicer arietinum]
COGYP_007129106.10neutral invertase [Gloeocapsa sp. PCC 7428]
Swissprottr|Q67XD9|CINV2_ARATH0Alkaline/neutral invertase CINV2 {ECO:0000305}
trEMBLtr|Q684K1|Q684K1_LOTJA0Putative neutral/alkaline invertase {ECO:0000313|EMBL:CAG30577.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00217189259194916+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH100


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0033926  glycopeptide alpha-N-acetylgalactosaminidase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000217s00014859.1PF12899.2Glyco_hydro_100915291.60E-220


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.622
SRR1783600control13.625
SRR1783602moderate drought stress10.165
SRR1811619moderate drought stress10.021

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.160
DRR006520Root Summer glycyrrhizin high producing strain17.913
DRR006521Root Winter glycyrrhizin high producing strain26.424
DRR006522Root Winter glycyrrhizin high producing strain25.659
DRR006523Root Summer glycyrrhizin low producing strain23.615
DRR006524Root Summer glycyrrhizin low producing strain23.313
DRR006525Leaf Summer glycyrrhizin high producing strain12.402
DRR006526Leaf Summer glycyrrhizin high producing strain12.210

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.419
SRR2868004Drought Stress(Tissue:root)66.070
SRR2967015Control (Tissue:root)57.757

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.369
SRR9715740Leave22.681
SRR9715741Leave49.268
SRR9715739Root10.404
SRR9715742Root34.835
SRR9715743Root33.064

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h55.974
SRR8749028MeJA induced 9h36.407
SRR8749029MeJA induced 9h64.657
SRR8749030Uninduced37.920
SRR8749031Uninduced67.452
SRR8749032Uninduced52.089

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.876
SRR8400027Control-Root36.879

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved