Gene detail information of Glyur000218s00011609.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35750.10histidine kinase 2
NRXP_003545073.10PREDICTED: histidine kinase 2-like [Glycine max]
COGYP_644044.11.00E-87multi-sensor hybrid histidine kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q9C5U2|AHK2_ARATH0Histidine kinase 2
trEMBLtr|K7M476|K7M476_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G01040.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002186302573815+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14489AHK2_3_4 EC:2.7.13.3 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0016310  phosphorylation


molecular_function

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000218s00011609.2PF02518.21HATPase_c531254.70E-22
Glyur000218s00011609.2PF00072.19Response_reg3094406.40E-21
Glyur000218s00011609.2PF07983.8X85346021.10E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.971
SRR1783600control16.106
SRR1783602moderate drought stress24.920
SRR1811619moderate drought stress24.705

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.849
DRR006520Root Summer glycyrrhizin high producing strain17.541
DRR006521Root Winter glycyrrhizin high producing strain7.336
DRR006522Root Winter glycyrrhizin high producing strain7.151
DRR006523Root Summer glycyrrhizin low producing strain20.329
DRR006524Root Summer glycyrrhizin low producing strain20.447
DRR006525Leaf Summer glycyrrhizin high producing strain9.163
DRR006526Leaf Summer glycyrrhizin high producing strain9.073

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.949
SRR2868004Drought Stress(Tissue:root)25.232
SRR2967015Control (Tissue:root)26.074

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.872
SRR9715740Leave12.430
SRR9715741Leave13.886
SRR9715739Root1.637
SRR9715742Root17.812
SRR9715743Root15.562

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.464
SRR8749028MeJA induced 9h12.367
SRR8749029MeJA induced 9h7.630
SRR8749030Uninduced6.428
SRR8749031Uninduced5.147
SRR8749032Uninduced6.823

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.003
SRR8400027Control-Root29.028

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved