Gene detail information of Glyur000218s00011611.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G04880.22.00E-65zinc-dependent activator protein-1
NRXP_003518571.10PREDICTED: WRKY transcription factor 1-like [Glycine max]
Swissprottr|Q9SI37|WRKY1_ARATH5.00E-72WRKY transcription factor 1
trEMBLtr|I1JJR0|I1JJR0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G47650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002188531588868-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000218s00011611.1PF03106.10WRKY1141704.80E-24
Glyur000218s00011611.1PF03106.10WRKY2483061.20E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.520
SRR1783600control10.429
SRR1783602moderate drought stress14.879
SRR1811619moderate drought stress14.586

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.393
DRR006520Root Summer glycyrrhizin high producing strain16.349
DRR006521Root Winter glycyrrhizin high producing strain17.399
DRR006522Root Winter glycyrrhizin high producing strain17.057
DRR006523Root Summer glycyrrhizin low producing strain18.191
DRR006524Root Summer glycyrrhizin low producing strain17.827
DRR006525Leaf Summer glycyrrhizin high producing strain17.446
DRR006526Leaf Summer glycyrrhizin high producing strain17.379

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.866
SRR2868004Drought Stress(Tissue:root)27.703
SRR2967015Control (Tissue:root)28.778

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.226
SRR9715740Leave23.407
SRR9715741Leave22.255
SRR9715739Root1.584
SRR9715742Root6.982
SRR9715743Root7.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.695
SRR8749028MeJA induced 9h18.941
SRR8749029MeJA induced 9h18.589
SRR8749030Uninduced21.649
SRR8749031Uninduced38.299
SRR8749032Uninduced24.066

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.237
SRR8400027Control-Root18.244

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved