Gene detail information of Glyur000218s00011613.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55560.14.00E-132Protein kinase superfamily protein
NRXP_007142505.10hypothetical protein PHAVU_008G286300g [Phaseolus vulgaris]
COGYP_003797667.11.00E-21putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprottr|Q6ICW6|WNK11_ARATH9.00E-166Probable serine/threonine-protein kinase WNK11
trEMBLtr|V7B9I9|V7B9I9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14499.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002189442096430+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000218s00011613.1PF00069.20Pkinase312854.20E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.230
SRR1783600control0.226
SRR1783602moderate drought stress0.302
SRR1811619moderate drought stress0.298

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.480
DRR006520Root Summer glycyrrhizin high producing strain0.532
DRR006521Root Winter glycyrrhizin high producing strain1.103
DRR006522Root Winter glycyrrhizin high producing strain1.146
DRR006523Root Summer glycyrrhizin low producing strain2.175
DRR006524Root Summer glycyrrhizin low producing strain1.913
DRR006525Leaf Summer glycyrrhizin high producing strain7.595
DRR006526Leaf Summer glycyrrhizin high producing strain7.516

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.319
SRR2868004Drought Stress(Tissue:root)0.237
SRR2967015Control (Tissue:root)0.120

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.010
SRR9715740Leave1.720
SRR9715741Leave1.662
SRR9715739Root0.000
SRR9715742Root0.278
SRR9715743Root0.391

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.235
SRR8749028MeJA induced 9h2.323
SRR8749029MeJA induced 9h3.537
SRR8749030Uninduced2.853
SRR8749031Uninduced6.577
SRR8749032Uninduced5.013

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.972
SRR8400027Control-Root0.997

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved