Gene detail

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Gene detail information of Glyur000219s00011560.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G13690.1	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	KHN30037.1	0	Inactive protein kinase [Glycine soja]
COG	YP_004269132.1	1.00E-21	serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprot	tr\|P0DH62\|Y4407_SELML	2.00E-154	Inactive protein kinase SELMODRAFT_444075
trEMBL	tr\|V7C0V7\|V7C0V7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW22531.1}

Sequence

Transcript Sequence

>Glyur000219s00011560.1
ATGAGTCGAGAACAACAGAAGCGAGGGAAGCAAGAAAAAGGTTCCAATGGTGCTGAGAAGGTTATTGTTGCTGTCAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACTCTTCTTGTGGTTGTACCTTCACAAAGTTCAGGCCGAAGATTATGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAGTAATCACAAGAAGTCAACTCCGGGAACAAGTTCAGAACAGAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTNCATGATGTCTATGATCCCAATAAGATAAATGTCAAGATTAAAATTGTTTCCGGATCACCCTGTGGAGCTGTGGCTGCAGAAGCCAAGAAAGCCCAAGCCAATTGGGTCGTATTAGATAAACAGCTCAAGCATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCCCAACCTAAGGTACTCCGTTTGAATTTGGTTGGATCTCAAAAGAAGGATCTTGAAGAAGCATGTTCACTACCTTCTGAGCAAGATGAGATTCCTGAAAAGCAAACCAAGAAGAAGAATGATTCTTTAAGTTCCATAAAAGGACCAGTGGTCACTCCAACTAGCAGCCCTGAGCTAGGGACATCATTTACTGCAACTGAAGCTGGTACTTCATCAGTTTCAAGCTCCGATCTTGGAACTTCACCATTTTTTATCTCTGAGATAAATGCCGAGTCAAAGAAAGAGGAAACTATCAAAGAAAATCAAGAACTTGATGATACTATTTCAGACACATACAGTGAAAATTTGTNCACATCTTCAGCAAGCTTGAGATTCCAGCCATGGATCAAAGATTTACTTTTACATCAACAATCATCTCAATGCACAGAAGAGAGATCTCATAATCAGCTTCAATTGTCTACAACTAGAGCTTTGATAGAAAAGTTCTCAAGGCTTGATAGAGAAGCTGAAATTGAAATCTCAACATATAAGACTGACTTGGATTTCAGTGGAAACGTAAGAGAAGCAGTAGCATTATCTAGAAATGCCCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTTGCCACTGGTGGGTTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGAGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTTGAAGTTCTGAGTTGTGCACAGCACCGAAATGTTGTTATGTTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTGCTGGTTTATGAGTACATATGTAATGGATCATTGGATTCTCATTTATATGGAACTCTTTCAGGGAGACAACGGAAATCATTAGAATGGTCTGCGCGGCAAAAAATTGCCATTGGGGCTGCTCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGACGGAGACACAGGTGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTTTTAGTGGAGCTTGTGACAGGGCGTAAAGCTGTGGATATCAACCGGCCCAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGNGTATGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCAGAGCATGAGGTCTCTTGCATGCTACATGCTGCATCATTATGCATAAGGCGAGATCCTTATTCCAGACCACGCATGTCACAGGTTCTGCGAATACTGGAGGGTGAGATGGTCATGGACACAAATTGCATTTTGACTCCTGGTTATGACGTGGGAAACCGGAGTTGTTGATTTTGGCCAGAAACGCAGCACCATTACACCGTGATGAGTTATTGGAAGCCTTGGGAAGCTCACTCTGAAGTACAGACCTGCCTATTATGCAGAAACACCATGGGAAAGCAGTTGACGATGGAAATTGCATTCTTGTTATNTCAAGTATGTTTCTTGCTTTCATATTTTGTAGTTCTATTGATATTTCTTTGCAGTGCAATCTAATTTTGCATCTGTATAGTAGAGGGAAGAAGGTAGGATAAGGTTAGTATATAGAAGCCTTTGAAGTTCTTTCAGAAATAATGTAAACTCGTGCTTAAATGGCCTTGATCAGACTCATAGAGCTGCATAGTATATGGCTCTATGCTCTTCAAATGGATCAAAAAACTTTTTGTAAGGTTGCTGAGTCTCCCTCTCTCTCTAGCCACTTCCCTATGCATGCATGTGT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00219	27641	32074	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.6.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000219s00011560.1	PF00069.20	Pkinase	404	671	2.40E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.260
SRR1783600	control	0.258
SRR1783602	moderate drought stress	0.632
SRR1811619	moderate drought stress	0.629

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.410
DRR006520	Root Summer glycyrrhizin high producing strain	0.414
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.594
DRR006524	Root Summer glycyrrhizin low producing strain	0.569
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.951
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.845

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	9.145
SRR2868004	Drought Stress(Tissue:root)	10.212
SRR2967015	Control (Tissue:root)	7.894

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	3.149
SRR9715740	Leave	0.811
SRR9715741	Leave	1.038
SRR9715739	Root	0.633
SRR9715742	Root	3.073
SRR9715743	Root	2.811

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.968
SRR8749028	MeJA induced 9h	7.097
SRR8749029	MeJA induced 9h	1.550
SRR8749030	Uninduced	0.783
SRR8749031	Uninduced	0.148
SRR8749032	Uninduced	0.263

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.633
SRR8400027	Control-Root	8.049