Gene detail information of Glyur000219s00011566.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51700.16.00E-30DOF zinc finger protein 1
NRXP_007150543.17.32E-96hypothetical protein PHAVU_005G161200g [Phaseolus vulgaris]
Swissprottr|O82155|DOF17_ARATH1.00E-44Dof zinc finger protein DOF1.7
trEMBLtr|V7BWZ7|V7BWZ7_PHAVU3.00E-96Uncharacterized protein {ECO:0000313|EMBL:ESW22537.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002197261173258+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000219s00011566.1PF02701.10zf-Dof16764.90E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control51.076
SRR1783600control52.534
SRR1783602moderate drought stress64.401
SRR1811619moderate drought stress87.070

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain58.244
DRR006520Root Summer glycyrrhizin high producing strain57.077
DRR006521Root Winter glycyrrhizin high producing strain64.481
DRR006522Root Winter glycyrrhizin high producing strain62.672
DRR006523Root Summer glycyrrhizin low producing strain107.708
DRR006524Root Summer glycyrrhizin low producing strain103.737
DRR006525Leaf Summer glycyrrhizin high producing strain11.273
DRR006526Leaf Summer glycyrrhizin high producing strain10.721

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.539
SRR2868004Drought Stress(Tissue:root)19.166
SRR2967015Control (Tissue:root)31.310

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.031
SRR9715740Leave39.876
SRR9715741Leave42.896
SRR9715739Root72.120
SRR9715742Root134.083
SRR9715743Root150.364

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.704
SRR8749028MeJA induced 9h26.357
SRR8749029MeJA induced 9h15.725
SRR8749030Uninduced4.715
SRR8749031Uninduced0.257
SRR8749032Uninduced0.136

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.015
SRR8400027Control-Root60.595

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved