Gene detail information of Glyur000219s00011567.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51720.10Amino acid dehydrogenase family protein
NRXP_003531631.10PREDICTED: NADP-specific glutamate dehydrogenase-like isoform X1 [Glycine max]
COGYP_001878642.12.00E-147glutamate dehydrogenase [Akkermansia muciniphila ATCC BAA-835]
Swissprottr|P28998|DHE4_CHLSO3.00E-129NADP-specific glutamate dehydrogenase (Fragment)
trEMBLtr|I1KUX4|I1KUX4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20930.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002197625083990+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00262E1.4.1.4, gdhA EC:1.4.1.4 Nitrogen metabolism map00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000219s00011567.1PF02812.13ELFV_dehydrog_N2423713.10E-47
Glyur000219s00011567.1PF00208.16ELFV_dehydrog3886352.90E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.943
SRR1783600control20.063
SRR1783602moderate drought stress21.202
SRR1811619moderate drought stress21.028

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.712
DRR006520Root Summer glycyrrhizin high producing strain30.340
DRR006521Root Winter glycyrrhizin high producing strain26.781
DRR006522Root Winter glycyrrhizin high producing strain25.935
DRR006523Root Summer glycyrrhizin low producing strain35.026
DRR006524Root Summer glycyrrhizin low producing strain35.218
DRR006525Leaf Summer glycyrrhizin high producing strain17.355
DRR006526Leaf Summer glycyrrhizin high producing strain17.191

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)63.450
SRR2868004Drought Stress(Tissue:root)64.576
SRR2967015Control (Tissue:root)71.832

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.279
SRR9715740Leave48.544
SRR9715741Leave56.656
SRR9715739Root8.184
SRR9715742Root34.926
SRR9715743Root30.177

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.492
SRR8749028MeJA induced 9h28.594
SRR8749029MeJA induced 9h12.319
SRR8749030Uninduced11.345
SRR8749031Uninduced5.586
SRR8749032Uninduced6.128

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root69.209
SRR8400027Control-Root68.585

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved