Gene detail information of Glyur000219s00011582.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26270.10phosphofructokinase 3
NRXP_003543617.10PREDICTED: 6-phosphofructokinase 3-like isoform X1 [Glycine max]
COGYP_003804939.12.00E-117phosphofructokinase [Spirochaeta smaragdinae DSM 11293]
Swissprottr|Q94AA4|PFKA3_ARATH0ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|I1MCW0|I1MCW0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G02400.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00219149605153662-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000219s00011582.1PF00365.15PFK1273551.00E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.988
SRR1783600control6.984
SRR1783602moderate drought stress4.211
SRR1811619moderate drought stress4.156

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.143
DRR006520Root Summer glycyrrhizin high producing strain3.146
DRR006521Root Winter glycyrrhizin high producing strain10.119
DRR006522Root Winter glycyrrhizin high producing strain9.690
DRR006523Root Summer glycyrrhizin low producing strain5.913
DRR006524Root Summer glycyrrhizin low producing strain5.970
DRR006525Leaf Summer glycyrrhizin high producing strain6.560
DRR006526Leaf Summer glycyrrhizin high producing strain6.470

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.709
SRR2868004Drought Stress(Tissue:root)14.019
SRR2967015Control (Tissue:root)13.329

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.073
SRR9715740Leave5.134
SRR9715741Leave2.305
SRR9715739Root1.718
SRR9715742Root4.893
SRR9715743Root4.447

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.021
SRR8749028MeJA induced 9h18.207
SRR8749029MeJA induced 9h27.416
SRR8749030Uninduced57.398
SRR8749031Uninduced28.857
SRR8749032Uninduced73.051

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.001
SRR8400027Control-Root14.565

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved