Gene detail information of Glyur000221s00012513.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35780.10ACT-like protein tyrosine kinase family protein
NRXP_003537665.10PREDICTED: probable serine/threonine-protein kinase DDB_G0267514-like [Glycine max]
COGYP_001958461.11.00E-43hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH5.00E-76Serine/threonine-protein kinase HT1
trEMBLtr|I1LI74|I1LI74_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G08720.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00221118280127356-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0008152  metabolic process


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016597  amino acid binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000221s00012513.1PF01842.20ACT1812282.40E-05
Glyur000221s00012513.1PF07714.12Pkinase_Tyr2955449.00E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.482
SRR1783600control18.656
SRR1783602moderate drought stress26.339
SRR1811619moderate drought stress26.217

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.829
DRR006520Root Summer glycyrrhizin high producing strain16.565
DRR006521Root Winter glycyrrhizin high producing strain12.529
DRR006522Root Winter glycyrrhizin high producing strain12.172
DRR006523Root Summer glycyrrhizin low producing strain20.668
DRR006524Root Summer glycyrrhizin low producing strain20.715
DRR006525Leaf Summer glycyrrhizin high producing strain10.625
DRR006526Leaf Summer glycyrrhizin high producing strain10.782

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.840
SRR2868004Drought Stress(Tissue:root)48.984
SRR2967015Control (Tissue:root)75.786

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.541
SRR9715740Leave32.281
SRR9715741Leave43.846
SRR9715739Root7.534
SRR9715742Root14.379
SRR9715743Root12.172

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.614
SRR8749028MeJA induced 9h26.378
SRR8749029MeJA induced 9h23.930
SRR8749030Uninduced15.173
SRR8749031Uninduced21.378
SRR8749032Uninduced23.669

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.571
SRR8400027Control-Root24.761

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved