Gene detail information of Glyur000222s00032429.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | EMS60024.1 | 5.14E-13 | hypothetical protein TRIUR3_06363 [Triticum urartu] |
| trEMBL | tr|J3N6E6|J3N6E6_ORYBR | 6.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB11G13820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00222 | 11553 | 12750 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K02472 | wecC | EC:1.1.1.336 | Amino sugar and nucleotide sugar metabolism | map00520 |
| Biofilm formation - Vibrio cholerae | map05111 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.061 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.390 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.011 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.098 |
| SRR2967015 | Control (Tissue:root) | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.093 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.028 |
| SRR9715743 | Root | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.135 |
| SRR8749029 | MeJA induced 9h | 0.028 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.103 |
| SRR8749032 | Uninduced | 0.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.048 |
| SRR8400027 | Control-Root | 0.048 |