Gene detail information of Glyur000223s00013824.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58500.14.00E-169protein phosphatase 2A-4
NRXP_003524949.10PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Glycine max]
COGYP_001541554.16.00E-36metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|Q9XGH7|PP2A_TOBAC0Serine/threonine-protein phosphatase PP2A catalytic subunit
trEMBLtr|I1KSA8|I1KSA8_SOYBN0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00223235010241973+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04382PPP2C EC:3.1.3.16 mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730
Hepatitis Cmap05160
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000223s00013824.1PF00149.23Metallophos532443.40E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.794
SRR1783600control35.251
SRR1783602moderate drought stress27.337
SRR1811619moderate drought stress27.451

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.650
DRR006520Root Summer glycyrrhizin high producing strain46.214
DRR006521Root Winter glycyrrhizin high producing strain58.231
DRR006522Root Winter glycyrrhizin high producing strain57.341
DRR006523Root Summer glycyrrhizin low producing strain39.699
DRR006524Root Summer glycyrrhizin low producing strain40.148
DRR006525Leaf Summer glycyrrhizin high producing strain36.764
DRR006526Leaf Summer glycyrrhizin high producing strain37.082

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.562
SRR2868004Drought Stress(Tissue:root)67.888
SRR2967015Control (Tissue:root)71.982

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.802
SRR9715740Leave59.664
SRR9715741Leave66.576
SRR9715739Root29.641
SRR9715742Root41.588
SRR9715743Root39.514

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h105.716
SRR8749028MeJA induced 9h55.698
SRR8749029MeJA induced 9h93.590
SRR8749030Uninduced38.452
SRR8749031Uninduced45.025
SRR8749032Uninduced45.882

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root72.028
SRR8400027Control-Root68.019

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved