Gene detail information of Glyur000224s00017358.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G35840.39.00E-156Sucrose-6F-phosphate phosphohydrolase family protein
NRAES60113.20sucrose phosphate phosphatase [Medicago truncatula]
COGYP_007058994.11.00E-57sucrose-6F-phosphate phosphohydrolase [Rivularia sp. PCC 7116]
Swissprottr|Q5IH13|SPP2_TOBAC0Sucrose-phosphatase 2
trEMBLtr|G7IDI2|G7IDI2_MEDTR0Sucrose phosphate phosphatase {ECO:0000313|EMBL:AES60113.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002241391117578+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07024SPP EC:3.1.3.24 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005986  sucrose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0016791  phosphatase activity

GO:0050307  sucrose-phosphate phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000224s00017358.1PF05116.8S6PP92612.00E-100
Glyur000224s00017358.1PF08472.5S6PP_C2623935.50E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.743
SRR1783600control5.173
SRR1783602moderate drought stress5.189
SRR1811619moderate drought stress5.191

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.827
DRR006520Root Summer glycyrrhizin high producing strain6.917
DRR006521Root Winter glycyrrhizin high producing strain4.825
DRR006522Root Winter glycyrrhizin high producing strain4.605
DRR006523Root Summer glycyrrhizin low producing strain8.369
DRR006524Root Summer glycyrrhizin low producing strain8.526
DRR006525Leaf Summer glycyrrhizin high producing strain4.489
DRR006526Leaf Summer glycyrrhizin high producing strain4.465

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.431
SRR2868004Drought Stress(Tissue:root)11.334
SRR2967015Control (Tissue:root)10.865

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.495
SRR9715740Leave8.664
SRR9715741Leave10.006
SRR9715739Root1.768
SRR9715742Root5.006
SRR9715743Root3.984

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.843
SRR8749028MeJA induced 9h5.368
SRR8749029MeJA induced 9h2.960
SRR8749030Uninduced4.406
SRR8749031Uninduced3.822
SRR8749032Uninduced2.319

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.779
SRR8400027Control-Root10.122

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved