Gene detail information of Glyur000224s00017377.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26230.16.00E-123uricase / urate oxidase / nodulin 35, putative
NRNP_001266028.10uricase-2 isozyme 1-like [Cicer arietinum]
COGYP_005529901.11.00E-49urate oxidase [Amycolatopsis mediterranei S699]
Swissprottr|P34798|URIC1_CANLI0Uricase-2 isozyme 1
trEMBLtr|Q9LD80|Q9LD80_CICAR0Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00224135446139044+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00365uaZ EC:1.7.3.3 Purine metabolism map00230
Caffeine metabolismmap00232


Gene Ontology

biological_process

GO:0006144  purine nucleobase metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004846  urate oxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000224s00017377.1PF01014.13Uricase131291.50E-23
Glyur000224s00017377.1PF01014.13Uricase1392901.70E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.906
SRR1783600control44.948
SRR1783602moderate drought stress57.747
SRR1811619moderate drought stress57.866

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.338
DRR006520Root Summer glycyrrhizin high producing strain48.332
DRR006521Root Winter glycyrrhizin high producing strain516.678
DRR006522Root Winter glycyrrhizin high producing strain497.530
DRR006523Root Summer glycyrrhizin low producing strain103.451
DRR006524Root Summer glycyrrhizin low producing strain102.842
DRR006525Leaf Summer glycyrrhizin high producing strain54.447
DRR006526Leaf Summer glycyrrhizin high producing strain56.270

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)111.290
SRR2868004Drought Stress(Tissue:root)185.386
SRR2967015Control (Tissue:root)170.723

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave99.197
SRR9715740Leave70.983
SRR9715741Leave144.261
SRR9715739Root61.042
SRR9715742Root71.009
SRR9715743Root68.873

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h172.593
SRR8749028MeJA induced 9h441.596
SRR8749029MeJA induced 9h372.457
SRR8749030Uninduced367.365
SRR8749031Uninduced651.795
SRR8749032Uninduced437.819

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root174.825
SRR8400027Control-Root124.792

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved