Gene detail information of Glyur000225s00014723.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36460.10Aldolase superfamily protein
NRAGV08373.10fructose-bisphosphate aldolase [Arachis hypogaea]
COGYP_922211.18.00E-124fructose-bisphosphate aldolase [Nocardioides sp. JS614]
Swissprottr|O65735|ALF_CICAR0Fructose-bisphosphate aldolase, cytoplasmic isozyme
trEMBLtr|T2B9M0|T2B9M0_ARAHY0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002256787370812+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000225s00014723.1PF00274.14Glycolytic113581.70E-173


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control901.208
SRR1783600control904.301
SRR1783602moderate drought stress622.671
SRR1811619moderate drought stress619.722

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1086.313
DRR006520Root Summer glycyrrhizin high producing strain1073.610
DRR006521Root Winter glycyrrhizin high producing strain4234.307
DRR006522Root Winter glycyrrhizin high producing strain4113.596
DRR006523Root Summer glycyrrhizin low producing strain2132.857
DRR006524Root Summer glycyrrhizin low producing strain2128.693
DRR006525Leaf Summer glycyrrhizin high producing strain201.676
DRR006526Leaf Summer glycyrrhizin high producing strain199.321

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1115.416
SRR2868004Drought Stress(Tissue:root)625.615
SRR2967015Control (Tissue:root)601.892

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave230.092
SRR9715740Leave172.016
SRR9715741Leave179.121
SRR9715739Root2032.211
SRR9715742Root935.786
SRR9715743Root1140.673

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2860.868
SRR8749028MeJA induced 9h1778.525
SRR8749029MeJA induced 9h3637.038
SRR8749030Uninduced1469.830
SRR8749031Uninduced1395.716
SRR8749032Uninduced2987.858

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root856.779
SRR8400027Control-Root887.792

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved