Gene detail information of Glyur000226s00010829.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40730.10Protein kinase family protein with ARM repeat domain
NRXP_003556441.10PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Glycine max]
trEMBLtr|I1NIJ6|I1NIJ6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G36180.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002267816390050-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005488  binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000226s00010829.1PF00069.20Pkinase662791.00E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.733
SRR1783600control30.987
SRR1783602moderate drought stress28.625
SRR1811619moderate drought stress28.283

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain32.710
DRR006520Root Summer glycyrrhizin high producing strain31.878
DRR006521Root Winter glycyrrhizin high producing strain25.144
DRR006522Root Winter glycyrrhizin high producing strain24.442
DRR006523Root Summer glycyrrhizin low producing strain38.891
DRR006524Root Summer glycyrrhizin low producing strain39.131
DRR006525Leaf Summer glycyrrhizin high producing strain16.471
DRR006526Leaf Summer glycyrrhizin high producing strain16.226

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.093
SRR2868004Drought Stress(Tissue:root)42.787
SRR2967015Control (Tissue:root)43.117

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.837
SRR9715740Leave23.032
SRR9715741Leave30.421
SRR9715739Root14.858
SRR9715742Root28.161
SRR9715743Root24.091

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.558
SRR8749028MeJA induced 9h50.038
SRR8749029MeJA induced 9h45.468
SRR8749030Uninduced25.363
SRR8749031Uninduced29.155
SRR8749032Uninduced30.238

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.814
SRR8400027Control-Root37.439

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved