Gene detail information of Glyur000226s00010832.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18530.1 | 2.00E-120 | Protein of unknown function (DUF707) |
| NR | XP_004495539.1 | 0 | PREDICTED: uncharacterized protein LOC101501273 isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1NIJ4|I1NIJ4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G36160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00226 | 97661 | 101797 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000226s00010832.1 | PF05212.7 | DUF707 | 107 | 421 | 5.20E-119 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.690 |
| SRR1783600 | control | 1.645 |
| SRR1783602 | moderate drought stress | 1.751 |
| SRR1811619 | moderate drought stress | 1.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.179 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.970 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.011 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.987 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.924 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.724 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.197 |
| SRR2868004 | Drought Stress(Tissue:root) | 50.282 |
| SRR2967015 | Control (Tissue:root) | 38.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 33.030 |
| SRR9715740 | Leave | 26.727 |
| SRR9715741 | Leave | 44.723 |
| SRR9715739 | Root | 0.521 |
| SRR9715742 | Root | 6.748 |
| SRR9715743 | Root | 4.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.747 |
| SRR8749028 | MeJA induced 9h | 34.056 |
| SRR8749029 | MeJA induced 9h | 21.532 |
| SRR8749030 | Uninduced | 46.924 |
| SRR8749031 | Uninduced | 147.349 |
| SRR8749032 | Uninduced | 65.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.092 |
| SRR8400027 | Control-Root | 7.329 |