Gene detail information of Glyur000227s00015118.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G06850.25.00E-392-oxoacid dehydrogenases acyltransferase family protein
NRKEH32295.12.53E-1112-oxoacid dehydrogenase acyltransferase family protein [Medicago truncatula]
COGYP_004466925.11.00E-18dihydrolipoamide acetyltransferase [Alteromonas sp. SN2]
Swissprottr|Q9M7Z1|ODB2_ARATH5.00E-47Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial (Precursor)
trEMBLtr|A0A072V2G4|A0A072V2G4_MEDTR9.00E-1122-oxoacid dehydrogenase acyltransferase family protein {ECO:0000313|EMBL:KEH32295.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002275079455538-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09699DBT, bkdB EC:2.3.1.168 Propanoate metabolism map00640
Valine, leucine and isoleucine degradationmap00280


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000227s00015118.1PF00364.17Biotin_lipoyl801527.40E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.122
SRR1783600control6.160
SRR1783602moderate drought stress9.647
SRR1811619moderate drought stress9.570

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.563
DRR006520Root Summer glycyrrhizin high producing strain6.468
DRR006521Root Winter glycyrrhizin high producing strain9.846
DRR006522Root Winter glycyrrhizin high producing strain9.540
DRR006523Root Summer glycyrrhizin low producing strain14.285
DRR006524Root Summer glycyrrhizin low producing strain14.401
DRR006525Leaf Summer glycyrrhizin high producing strain3.786
DRR006526Leaf Summer glycyrrhizin high producing strain3.797

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.589
SRR2868004Drought Stress(Tissue:root)33.097
SRR2967015Control (Tissue:root)45.101

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.768
SRR9715740Leave6.118
SRR9715741Leave8.217
SRR9715739Root1.130
SRR9715742Root3.843
SRR9715743Root2.269

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.087
SRR8749028MeJA induced 9h15.213
SRR8749029MeJA induced 9h8.321
SRR8749030Uninduced20.079
SRR8749031Uninduced52.136
SRR8749032Uninduced28.525

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.396
SRR8400027Control-Root7.179

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved