Gene detail information of Glyur000227s00015133.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G15840.10BTB/POZ domain-containing protein
NRXP_003528640.10PREDICTED: uncharacterized protein LOC100806711 [Glycine max]
trEMBLtr|I1KMY7|I1KMY7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G37660.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00227160625167196-


Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin FamilyBTB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000227s00015133.1PF00651.26BTB631679.80E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.378
SRR1783600control14.302
SRR1783602moderate drought stress12.242
SRR1811619moderate drought stress12.260

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.875
DRR006520Root Summer glycyrrhizin high producing strain13.689
DRR006521Root Winter glycyrrhizin high producing strain8.576
DRR006522Root Winter glycyrrhizin high producing strain8.456
DRR006523Root Summer glycyrrhizin low producing strain12.494
DRR006524Root Summer glycyrrhizin low producing strain12.301
DRR006525Leaf Summer glycyrrhizin high producing strain7.879
DRR006526Leaf Summer glycyrrhizin high producing strain7.833

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.404
SRR2868004Drought Stress(Tissue:root)18.086
SRR2967015Control (Tissue:root)18.565

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.069
SRR9715740Leave6.755
SRR9715741Leave7.852
SRR9715739Root5.465
SRR9715742Root13.684
SRR9715743Root12.178

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.246
SRR8749028MeJA induced 9h10.331
SRR8749029MeJA induced 9h4.668
SRR8749030Uninduced3.852
SRR8749031Uninduced2.067
SRR8749032Uninduced2.422

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.566
SRR8400027Control-Root20.738

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved