Gene detail information of Glyur000228s00011906.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31120.10SHK1 binding protein 1
NRXP_003603517.10Protein arginine N-methyltransferase [Medicago truncatula]
COGYP_003265314.18.00E-14histone-arginine N-methyltransferase [Haliangium ochraceum DSM 14365]
Swissprottr|Q8GWT4|ANM15_ARATH0Protein arginine N-methyltransferase 1.5
trEMBLtr|G7JCB5|G7JCB5_MEDTR0Protein arginine N-methyltransferase {ECO:0000256|PIRNR:PIRNR015894}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002288299391669-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02516PRMT5, HSL7 EC:2.1.1.320 RNA transport map03013
MAPK signaling pathway - yeastmap04011
Cell cycle - yeastmap04111


Gene Ontology

biological_process

GO:0006479  protein methylation

GO:0035246  peptidyl-arginine N-methylation


molecular_function

GO:0008168  methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000228s00011906.1PF05185.11PRMT51736124.70E-171


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.662
SRR1783600control15.833
SRR1783602moderate drought stress17.573
SRR1811619moderate drought stress17.540

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.265
DRR006520Root Summer glycyrrhizin high producing strain28.888
DRR006521Root Winter glycyrrhizin high producing strain12.856
DRR006522Root Winter glycyrrhizin high producing strain12.283
DRR006523Root Summer glycyrrhizin low producing strain23.977
DRR006524Root Summer glycyrrhizin low producing strain23.646
DRR006525Leaf Summer glycyrrhizin high producing strain7.044
DRR006526Leaf Summer glycyrrhizin high producing strain7.279

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.760
SRR2868004Drought Stress(Tissue:root)18.040
SRR2967015Control (Tissue:root)18.033

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.006
SRR9715740Leave11.620
SRR9715741Leave6.348
SRR9715739Root13.163
SRR9715742Root23.956
SRR9715743Root20.591

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.148
SRR8749028MeJA induced 9h25.862
SRR8749029MeJA induced 9h28.337
SRR8749030Uninduced1.163
SRR8749031Uninduced0.960
SRR8749032Uninduced2.521

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.067
SRR8400027Control-Root26.441

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved