Gene detail

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Gene detail information of Glyur000230s00016883.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38040.1	8.00E-75	Exostosin family protein
NR	KHN34685.1	0	Putative glycosyltransferase [Glycine soja]
Swissprot	tr\|Q9FFN2\|GLYT3_ARATH	8.00E-70	Probable glycosyltransferase At5g03795
trEMBL	tr\|K7MXU9\|K7MXU9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G29020.3}

Sequence

Transcript Sequence

>Glyur000230s00016883.1
ATGCTTCGTCCTTCGTTGCTCTATTACTACTCTCAGCGCCGTGTTACAGGCTCATTCAGGGGCTTCTTCTTCATTCCCACAACCTTAGCTCTCTTAACCTCTCTTTCCATTCTCTTCTATATTTACTCTACCTCCAACATCTTCACCCACCACCACCACCACCAAACCCAATCCACTCCTCACTTCAAATCACCATCACCCTTTTCCACTTTCCCTTCTTCCACCCATATCTCGCACAACAATGCTTCTGAGTTCACCAAGTCTCAGACTTTCCAATTGGGTCATGGCCATGTCCCACAAAGTCAACGGGGCCTACCACCCCAATTCAGCTCAAAGGGAAAATTTGAGAAAAACAACAACGTGTTCCATGATAGAGATATCTTTCTGGAAGACTATAAAGAAATGAATAGGAGCTTTAAGATATATGTTTATCCTCACAGGGAAGACGATCCTTTTGCGAATGTGCTTTTGCCTGTGGAATCTGAACCTGGTGGAAATTATGCCAGTGAAAGTTACTTCAAGAAGGTGCTTATGAAGAGCCATTTCATCACAAAAGATCCCTTGGAGGCAGATCTTTTCTTTCTGCCCTTTTCCATAGCAAGATTGCGGCATGATCGTAGAGTTGGCGTGGGAGGTATCCAAGACTTCATTAGAGACTACATCCGGAATATCAGTCACCAGTATCCGTACTGGAACCACACAGGTGGTGCCGATCACTTCTATGTGGCTTGTCATTCGATTGGAAGGTCTGCAATGGAGAAAGCACCTGAGGTGATATTCAATGCCATTCANGTTGTGTGCTCATCAAGTTATTTCCTAACTGGGTATGTTGCTCATAAGGATACATCCCTACCGCAAATTTGGCCAAGAAAAGGAAATCCCCCCAACCTTGTTTCGTCGAAGAGGAAAAAGCTGGCTTTCTTTGCTGGAAGAGTTAATTCCCCAGTACGCATAAAGCTTCTCGAGACATGGAAAAATGATTCAGAGATCTTTGTTCACCATGGAAGGCTCAAAACATCCTATGCCGACGAGATGTTAGGAAGCAAGTTCTGCCTTCATGTTAAAGGCTTCGAAGTGAACACNGCTCGTATCGGAGATTCTCTGTACTATGGTTGCGTCCCGGTGATCATTGCCAACTATTATGACCTTCCATTTGCAGATGTGTTGAACTGGAACAGCTTCTCAGTTACTGTCACTACATCGGATATACCTCTACTGAAAAAGATCCTCAAAGGTATCATCNGTTCCAATGAATATTTGATGCTACAAAGGAATGTCTTGAAGGTGAGAACACACTTCCAATGGCATTCACCCCCTCTTGACTTTGATGCATTCTACATGGTTATGTATGAATTGTGGCTTAGACGAAGTTCTATAAAAATTTCATTGGGGAATTCTACGAAACCCCATTAGATTTATTTTAAGTGTTGTATTGGTTACTCTGTATAATAGCATCATTGAAGAAC

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00230	99505	103298	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000230s00016883.1	PF03016.10	Exostosin	136	413	2.40E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.763
SRR1783600	control	4.542
SRR1783602	moderate drought stress	4.904
SRR1811619	moderate drought stress	5.014

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.784
DRR006520	Root Summer glycyrrhizin high producing strain	2.589
DRR006521	Root Winter glycyrrhizin high producing strain	2.278
DRR006522	Root Winter glycyrrhizin high producing strain	2.367
DRR006523	Root Summer glycyrrhizin low producing strain	2.667
DRR006524	Root Summer glycyrrhizin low producing strain	2.667
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.492
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.772

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	6.366
SRR2868004	Drought Stress(Tissue:root)	7.243
SRR2967015	Control (Tissue:root)	7.359

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	5.471
SRR9715740	Leave	3.833
SRR9715741	Leave	6.084
SRR9715739	Root	0.650
SRR9715742	Root	1.460
SRR9715743	Root	1.644

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.138
SRR8749028	MeJA induced 9h	8.849
SRR8749029	MeJA induced 9h	11.582
SRR8749030	Uninduced	7.805
SRR8749031	Uninduced	9.864
SRR8749032	Uninduced	7.728

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	7.269
SRR8400027	Control-Root	7.956