Gene detail information of Glyur000230s00016893.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20950.25.00E-130Glycosyl hydrolase family protein
NRXP_004493184.10PREDICTED: lysosomal beta glucosidase-like isoform X4 [Cicer arietinum]
COGYP_003291877.11.00E-104glycoside hydrolase [Rhodothermus marinus DSM 4252]
Swissprottr|Q94KD8|BXL2_ARATH2.00E-18Probable beta-D-xylosidase 2 (Precursor)
trEMBLtr|V7CXE8|V7CXE8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW33960.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00230160836165950-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05349bglX EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000230s00016893.1PF00933.16Glyco_hydro_331209.20E-30
Glyur000230s00016893.1PF01915.17Glyco_hydro_3_C1593523.00E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.626
SRR1783600control8.521
SRR1783602moderate drought stress9.175
SRR1811619moderate drought stress9.099

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.366
DRR006520Root Summer glycyrrhizin high producing strain11.992
DRR006521Root Winter glycyrrhizin high producing strain8.243
DRR006522Root Winter glycyrrhizin high producing strain8.031
DRR006523Root Summer glycyrrhizin low producing strain10.109
DRR006524Root Summer glycyrrhizin low producing strain10.410
DRR006525Leaf Summer glycyrrhizin high producing strain0.977
DRR006526Leaf Summer glycyrrhizin high producing strain1.075

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.081
SRR2868004Drought Stress(Tissue:root)16.580
SRR2967015Control (Tissue:root)23.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.057
SRR9715740Leave0.411
SRR9715741Leave0.698
SRR9715739Root2.073
SRR9715742Root2.939
SRR9715743Root3.930

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.347
SRR8749028MeJA induced 9h6.480
SRR8749029MeJA induced 9h6.646
SRR8749030Uninduced7.545
SRR8749031Uninduced10.317
SRR8749032Uninduced7.025

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.862
SRR8400027Control-Root26.259

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved