Gene detail information of Glyur000231s00022077.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G18700.10trehalose phosphatase/synthase 11
NRXP_007154820.10hypothetical protein PHAVU_003G150400g [Phaseolus vulgaris]
COGYP_006545085.14.00E-119alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q9ZV48|TPS11_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
trEMBLtr|V7C9K3|V7C9K3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26814.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00231173559177086-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000231s00022077.1PF00982.16Glyco_transf_20555509.30E-170
Glyur000231s00022077.1PF02358.11Trehalose_PPase6018336.70E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.850
SRR1783600control2.907
SRR1783602moderate drought stress8.810
SRR1811619moderate drought stress8.632

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.749
DRR006520Root Summer glycyrrhizin high producing strain9.230
DRR006521Root Winter glycyrrhizin high producing strain61.129
DRR006522Root Winter glycyrrhizin high producing strain59.517
DRR006523Root Summer glycyrrhizin low producing strain17.584
DRR006524Root Summer glycyrrhizin low producing strain17.675
DRR006525Leaf Summer glycyrrhizin high producing strain8.112
DRR006526Leaf Summer glycyrrhizin high producing strain8.017

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.066
SRR2868004Drought Stress(Tissue:root)69.939
SRR2967015Control (Tissue:root)127.824

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave80.674
SRR9715740Leave44.487
SRR9715741Leave98.845
SRR9715739Root11.518
SRR9715742Root42.333
SRR9715743Root36.833

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h125.167
SRR8749028MeJA induced 9h392.514
SRR8749029MeJA induced 9h181.612
SRR8749030Uninduced153.767
SRR8749031Uninduced394.153
SRR8749032Uninduced252.858

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.604
SRR8400027Control-Root14.013

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved