Gene detail information of Glyur000235s00019549.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01210.10Leucine-rich repeat protein kinase family protein
NRXP_003555253.10PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Glycine max]
COGYP_003194814.17.00E-28hypothetical protein RB2501_09035 [Robiginitalea biformata HTCC2501]
Swissprottr|Q9C9N5|Y1668_ARATH0Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 (Precursor)
trEMBLtr|I1NFP5|I1NFP5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G25570.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00235110420113023-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000235s00019549.1PF08263.7LRRNT_224628.60E-12
Glyur000235s00019549.1PF13516.1LRR_61601771.5
Glyur000235s00019549.1PF00560.28LRR_11872090.049
Glyur000235s00019549.1PF00069.20Pkinase4187013.20E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.508
SRR1783600control15.515
SRR1783602moderate drought stress10.774
SRR1811619moderate drought stress10.478

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.701
DRR006520Root Summer glycyrrhizin high producing strain17.392
DRR006521Root Winter glycyrrhizin high producing strain3.806
DRR006522Root Winter glycyrrhizin high producing strain3.690
DRR006523Root Summer glycyrrhizin low producing strain14.191
DRR006524Root Summer glycyrrhizin low producing strain13.913
DRR006525Leaf Summer glycyrrhizin high producing strain4.322
DRR006526Leaf Summer glycyrrhizin high producing strain4.307

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.967
SRR2868004Drought Stress(Tissue:root)14.308
SRR2967015Control (Tissue:root)17.978

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.100
SRR9715740Leave3.674
SRR9715741Leave3.135
SRR9715739Root16.703
SRR9715742Root18.175
SRR9715743Root16.431

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.280
SRR8749028MeJA induced 9h3.807
SRR8749029MeJA induced 9h2.115
SRR8749030Uninduced0.546
SRR8749031Uninduced0.122
SRR8749032Uninduced0.155

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.465
SRR8400027Control-Root39.696

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved