Gene detail information of Glyur000235s00019562.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18390.22.00E-153Protein kinase superfamily protein
NRXP_006604084.10PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X1 [Glycine max]
COGYP_002763346.12.00E-28putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|P0C5E2|Y1839_ARATH0Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|I1L2R0|I1L2R0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G19730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00235185960196612+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000235s00019562.1PF13947.1GUB_WAK_bind1082157.40E-11
Glyur000235s00019562.1PF14380.1WAK_assoc2452934.40E-13
Glyur000235s00019562.1PF00069.20Pkinase3926591.10E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.549
SRR1783600control7.225
SRR1783602moderate drought stress6.226
SRR1811619moderate drought stress5.666

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.140
DRR006520Root Summer glycyrrhizin high producing strain7.259
DRR006521Root Winter glycyrrhizin high producing strain3.677
DRR006522Root Winter glycyrrhizin high producing strain3.845
DRR006523Root Summer glycyrrhizin low producing strain21.650
DRR006524Root Summer glycyrrhizin low producing strain21.554
DRR006525Leaf Summer glycyrrhizin high producing strain7.557
DRR006526Leaf Summer glycyrrhizin high producing strain6.946

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.325
SRR2868004Drought Stress(Tissue:root)26.003
SRR2967015Control (Tissue:root)25.803

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.058
SRR9715740Leave18.331
SRR9715741Leave28.764
SRR9715739Root1.430
SRR9715742Root12.419
SRR9715743Root8.551

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.233
SRR8749028MeJA induced 9h20.504
SRR8749029MeJA induced 9h8.864
SRR8749030Uninduced39.293
SRR8749031Uninduced27.011
SRR8749032Uninduced11.578

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.310
SRR8400027Control-Root11.106

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved