Gene detail information of Glyur000235s00019568.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18390.27.00E-71Protein kinase superfamily protein
NRXP_004497059.17.89E-115PREDICTED: probable serine/threonine-protein kinase At1g18390-like [Cicer arietinum]
COGYP_645024.14.00E-16serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|P0C5E2|Y1839_ARATH2.00E-82Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|K7N306|K7N306_SOYBN4.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G25471.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00235238784239732+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000235s00019568.1PF07714.12Pkinase_Tyr51306.20E-26
Glyur000235s00019568.1PF07714.12Pkinase_Tyr1351649.40E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.243
SRR1783600control0.312
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.283
DRR006520Root Summer glycyrrhizin high producing strain0.322
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.141
DRR006524Root Summer glycyrrhizin low producing strain0.141
DRR006525Leaf Summer glycyrrhizin high producing strain27.511
DRR006526Leaf Summer glycyrrhizin high producing strain26.360

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.000
SRR2868004Drought Stress(Tissue:root)0.025
SRR2967015Control (Tissue:root)0.050

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave80.028
SRR9715740Leave83.694
SRR9715741Leave114.874
SRR9715739Root1.567
SRR9715742Root2.382
SRR9715743Root2.389

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.460
SRR8749028MeJA induced 9h0.573
SRR8749029MeJA induced 9h0.242
SRR8749030Uninduced0.965
SRR8749031Uninduced0.000
SRR8749032Uninduced0.116

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.036
SRR8400027Control-Root0.406

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved