Gene detail information of Glyur000236s00014226.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G49970.18.00E-67pyridoxin (pyrodoxamine) 5'-phosphate oxidase
NRXP_003522762.14.06E-104PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like isoform X1 [Glycine max]
COGYP_005440389.12.00E-13hypothetical protein CLDAP_04520 [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|Q9LTX3|PPOX1_ARATH4.00E-78Probable NAD(P)HX epimerase (Precursor)
trEMBLtr|I1JV56|I1JV56_SOYBN6.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09950.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002367200573700-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00275pdxH, PNPO EC:1.4.3.5 Vitamin B6 metabolism map00750


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000236s00014226.1PF03853.10YjeF_N1102211.00E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.905
SRR1783600control39.829
SRR1783602moderate drought stress34.572
SRR1811619moderate drought stress33.983

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.188
DRR006520Root Summer glycyrrhizin high producing strain17.590
DRR006521Root Winter glycyrrhizin high producing strain11.012
DRR006522Root Winter glycyrrhizin high producing strain10.436
DRR006523Root Summer glycyrrhizin low producing strain7.940
DRR006524Root Summer glycyrrhizin low producing strain8.126
DRR006525Leaf Summer glycyrrhizin high producing strain45.023
DRR006526Leaf Summer glycyrrhizin high producing strain45.286

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.986
SRR2868004Drought Stress(Tissue:root)22.697
SRR2967015Control (Tissue:root)26.048

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.753
SRR9715740Leave28.233
SRR9715741Leave28.048
SRR9715739Root15.188
SRR9715742Root16.376
SRR9715743Root17.647

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.265
SRR8749028MeJA induced 9h16.007
SRR8749029MeJA induced 9h10.957
SRR8749030Uninduced0.915
SRR8749031Uninduced0.220
SRR8749032Uninduced1.921

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.221
SRR8400027Control-Root26.466

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved