Gene detail information of Glyur000236s00014229.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42630.1 | 3.00E-42 | Homeodomain-like superfamily protein |
| NR | XP_006581228.1 | 1.60E-115 | PREDICTED: probable transcription factor KAN4-like [Glycine max] |
| Swissprot | tr|Q9FJV5|KAN4_ARATH | 1.00E-49 | Probable transcription factor KAN4 |
| trEMBL | tr|K7KSW9|K7KSW9_SOYBN | 6.00E-116 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G03901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00236 | 80196 | 82624 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000236s00014229.1 | PF00249.26 | Myb_DNA-binding | 127 | 178 | 1.20E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.127 |
| SRR1783600 | control | 0.167 |
| SRR1783602 | moderate drought stress | 0.271 |
| SRR1811619 | moderate drought stress | 0.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.554 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.345 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.191 |
| SRR2967015 | Control (Tissue:root) | 1.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.257 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.003 |
| SRR8749028 | MeJA induced 9h | 0.063 |
| SRR8749029 | MeJA induced 9h | 0.064 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.272 |
| SRR8400027 | Control-Root | 0.445 |