Gene detail information of Glyur000236s00014240.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66850.14.00E-118mitogen-activated protein kinase kinase kinase 5
NRXP_003602992.10Mitogen-activated protein kinase kinase kinase [Medicago truncatula]
COGYP_004223283.11.00E-27serine/threonine protein kinase [Microbacterium testaceum StLB037]
Swissprottr|Q9CAD5|YODA_ARATH1.00E-92Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|G7J5S7|G7J5S7_MEDTR0MAP kinase {ECO:0000313|EMBL:AES73243.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00236138055143985+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000236s00014240.1PF00069.20Pkinase2745413.30E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.799
SRR1783600control11.946
SRR1783602moderate drought stress13.620
SRR1811619moderate drought stress13.523

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.878
DRR006520Root Summer glycyrrhizin high producing strain12.603
DRR006521Root Winter glycyrrhizin high producing strain14.617
DRR006522Root Winter glycyrrhizin high producing strain14.012
DRR006523Root Summer glycyrrhizin low producing strain18.069
DRR006524Root Summer glycyrrhizin low producing strain18.028
DRR006525Leaf Summer glycyrrhizin high producing strain14.015
DRR006526Leaf Summer glycyrrhizin high producing strain14.193

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.055
SRR2868004Drought Stress(Tissue:root)31.664
SRR2967015Control (Tissue:root)25.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.940
SRR9715740Leave22.564
SRR9715741Leave30.484
SRR9715739Root4.201
SRR9715742Root14.808
SRR9715743Root13.419

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.934
SRR8749028MeJA induced 9h70.339
SRR8749029MeJA induced 9h37.275
SRR8749030Uninduced120.974
SRR8749031Uninduced131.956
SRR8749032Uninduced69.645

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.073
SRR8400027Control-Root16.634

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved