Gene detail information of Glyur000236s00014246.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50060.12.00E-46myb domain protein 77
NRXP_004501595.17.66E-115PREDICTED: transcriptional activator Myb-like [Cicer arietinum]
Swissprottr|Q9FDW1|MYB44_ARATH9.00E-57Transcription factor MYB44
trEMBLtr|V5T6N4|V5T6N4_ARAHY2.00E-107Putative R2R3 MYB protein 1 {ECO:0000313|EMBL:AHB59589.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00236162068162808-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000236s00014246.1PF00249.26Myb_DNA-binding31764.60E-17
Glyur000236s00014246.1PF00249.26Myb_DNA-binding851276.10E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.992
SRR1783600control11.139
SRR1783602moderate drought stress64.211
SRR1811619moderate drought stress64.609

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain146.514
DRR006520Root Summer glycyrrhizin high producing strain141.833
DRR006521Root Winter glycyrrhizin high producing strain1.265
DRR006522Root Winter glycyrrhizin high producing strain0.954
DRR006523Root Summer glycyrrhizin low producing strain141.674
DRR006524Root Summer glycyrrhizin low producing strain142.530
DRR006525Leaf Summer glycyrrhizin high producing strain16.318
DRR006526Leaf Summer glycyrrhizin high producing strain15.998

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.217
SRR2868004Drought Stress(Tissue:root)54.667
SRR2967015Control (Tissue:root)120.297

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave259.972
SRR9715740Leave178.259
SRR9715741Leave195.969
SRR9715739Root757.764
SRR9715742Root637.812
SRR9715743Root632.489

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h505.846
SRR8749028MeJA induced 9h497.859
SRR8749029MeJA induced 9h587.448
SRR8749030Uninduced422.307
SRR8749031Uninduced173.502
SRR8749032Uninduced494.258

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.794
SRR8400027Control-Root102.754

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved