Gene detail information of Glyur000237s00014382.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47460.1 | 1.00E-60 | myb domain protein 12 |
| NR | XP_004494411.1 | 3.65E-132 | PREDICTED: transcription factor MYB12-like [Cicer arietinum] |
| Swissprot | tr|O22264|MYB12_ARATH | 6.00E-72 | Transcription factor MYB12 |
| trEMBL | tr|G7KSR7|G7KSR7_MEDTR | 4.00E-121 | Myb transcription factor {ECO:0000313|EMBL:AES82168.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00237 | 3124 | 6807 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000237s00014382.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 1.10E-13 |
| Glyur000237s00014382.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 6.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.188 |
| SRR1783600 | control | 5.636 |
| SRR1783602 | moderate drought stress | 2.876 |
| SRR1811619 | moderate drought stress | 2.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.643 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.441 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.037 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.068 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.732 |
| SRR2967015 | Control (Tissue:root) | 4.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.473 |
| SRR9715740 | Leave | 1.819 |
| SRR9715741 | Leave | 0.495 |
| SRR9715739 | Root | 1.200 |
| SRR9715742 | Root | 8.654 |
| SRR9715743 | Root | 6.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.836 |
| SRR8400027 | Control-Root | 4.381 |